Welcome to RADCamp 2024 - The San Francisco Edition
September 12-13, 2024
Boardroom (L1)
California Academy of Sciences
San Francisco, CA
Entrance and Location
We will be meeting in the Boardroom at the Cal Academy. To enter, please use the Academy Staff/Business Entrance located at 75 Nancy Pelosi Drive (map). When you enter you will need to sign in at the reception desk. The desk staff are aware of our workshop and will be happy to help you get signed in and point you to the boardroom.
Organisers, Instructors, and Facilitators
- Isaac Overcast - California Academy of Sciences
- Arianna Kuhn - Virginia Museum of Natural History
Schedule
| Times | Thursday | Friday |
|---|---|---|
| 8:30-9:00 | Welcome & Introductions | Check-in & Recap Day 1 |
| 9:00-10:15 | Intro to RADSeq data; RADSeq Data Quality Control: FASTQC | Assemble mystery data in small groups & Intro to Jupyter Notebooks |
| 10:15-10:30 | Coffee Break | Coffee Break |
| 10:30-12:00 | RADSeq Data Assembly: ipyrad Part I | Phylogenetic Inference: RAxML |
| 12:00-13:30 | Take a group photo & then Lunch | Lunch |
| 13:30-15:15 | RADSeq Data Assembly: ipyrad Part II | Population Genetic Analysis: PCA |
| 15:15-15:30 | N/A | Coffee Break |
| 15:30-17:00 | N/A | Open Work Session |
RADCamp San Francisco 2024 Group Photo
Exit Survey
Please spend a few minutes to fill the exit survey to help us improve future RADCamps.
Acknowledgements
RADCamp tutorial contributors and instructors (over the years): Isaac Overcast, Deren Eaton, Sandra Hoffberg, Natalia Bayona-Vasquez, Mariana Vasconcellos, Laura Bertola, Josiah Kuja, Anhubab Kahn, Arianna Kuhn.